Supplementary Material to

Comprehensive Evaluation of Protein Structure Alignment Methods: Scoring by Geometric Measures
Rachel Kolodny, Patrice Koehl, and Michael Levitt

The list of 2930 CATH v.2.4 domains that we used can be found here

The list of structure pairs found by only one method (as summarized in Table 3) can be found here (a value of 100 means that no significant alignment was found)

ROC curves and average score values for all prefixes (extension of Figure 1) - Click on image for the pdf file (allows zooming in).