Supplementary material to
Segment Based Approach for Multiple Sequence Alignment
by
Pankaj K. Agarwal, Yonatan Bilu, and Rachel Kolodny
Examples of alignments
Human proteins |
full DP |
gapped BLAST |
un-gapped BLAST |
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DP |
Actual |
DP |
Actual |
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| MATK, SRC, ABL1, GRB2 | 66,511,986,450 |
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| PTK6, PTK7, RET, SRMS, DDR1 | 2.39e14 |
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| GBAS, GBI1, GBT1, GB11, GB12 | 6.622e12 |
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